The Open Protein Structure Annotation Network
PDB Keyword


    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary

    Title Crystal Structure of the GGDEF domain from Marinobacter aquaeolei diguanylate cyclase complexed with c-di-GMP. To be Published
    Site NESGC
    PDB Id 3ign Target Id MqR89A
    Molecular Characteristics
    Source Marinobacter aquaeolei
    Alias Ids TPS31801,, PF00990 Molecular Weight 18956.15 Da.
    Residues 168 Isoelectric Point 5.04
    Sequence eqlaklsmtdrltgllnrgtwenlvdaeyerfrrygqatslvmfdidhfkpvndtyghlagdevirhta dvtrnnirqsdsagryggeefgiilpetdaesarvicerireaiekstvstsagdiqytvsmgiaqlte tpenymqwmqkadealykakesgrnkvvvs
      BLAST   FFAS

    Structure Determination
    Method XRAY Chains 1
    Resolution (Å) 1.83 Rfree 0.2405
    Matthews' coefficent 2.55 Rfactor 0.1950
    Waters 168 Solvent Content 51.72

    Ligand Information
    Ligands C2E (9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10,) x 2


    Google Scholar output for 3ign
    1. Diversity of structure and function of response regulator output domains
    MY Galperin - Current opinion in microbiology, 2010 - Elsevier
    2. Small angle X_ray scattering as a complementary tool for high_throughput structural studies
    TD Grant, JR Luft, JR Wolfley, H Tsuruta, A Martel - , 2011 - Wiley Online Library
    3. Discovery notes Presence of a classical RRM-fold palm domain in Thg1-type 3'-5'nucleic acid polymerases and the origin of the GGDEF and CRISPR
    V Anantharaman, LM Iyer, L Aravind - 2010 - biomedcentral.com
    4. The structure and inhibition of a GGDEF diguanylate cyclase complexed with (c-di-GMP) 2 at the active site
    CY Yang, KH Chin, MLC Chuah, ZX Liang - Section D: Biological , 2011 - scripts.iucr.org
    5. Structural adaptation of extreme halophilic proteins through decrease of conserved hydrophobic contact surface
    A Siglioccolo, A Paiardini, M Piscitelli - BMC Structural , 2011 - biomedcentral.com
    6. Crystal structure of a catalytically active GG (D/E) EF diguanylate cyclase domain from Marinobacter aquaeolei with bound c-di-GMP product
    SM Vorobiev, H Neely, B Yu, J Seetharaman - Journal of structural and , 2012 - Springer

    Protein Summary

    Ligand Summary




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