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The Open Protein Structure Annotation Network
PDB Keyword
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1nn4

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary

    Title The 2.2 A resolution structure of RpiB/AlsB from Escherichia coli illustrates a new approach to the ribose-5-phosphate isomerase reaction. J.Mol.Biol. 332 1083-1094 2003
    Site MCSG
    PDB Id 1nn4 Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS4437,AAC77051, 562
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 4
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 2.83 Rfactor 0.216
    Waters
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    Solvent Content 56.59

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 1nn4
    1. Protein surface analysis for function annotation in high_throughput structural genomics pipeline
    TA Binkowski, A Joachimiak, J Liang - Protein science, 2005 - Wiley Online Library
     
    2. Finding functional sites in structural genomics proteins
    A Stark, A Shkumatov, RB Russell - Structure, 2004 - Elsevier
     
    3. The 2.2 Resolution Structure of RpiB/AlsB from Escherichia coli Illustrates a New Approach to the Ribose-5-phosphate Isomerase Reaction
    RG Zhang, CE Andersson, T Skarina - Journal of molecular , 2003 - Elsevier
     
    4. Mycobacterium tuberculosis Ribose-5-phosphate Isomerase has a Known Fold, but a Novel Active Site
    AK Roos, CE Andersson, T Bergfors - Journal of molecular , 2004 - Elsevier
     
    5. Crystal structure of a ribose_5_phosphate isomerase RpiB (TM1080) from Thermotoga maritima at 1.90 resolution
    Q Xu, R Schwarzenbacher, D McMullan - Proteins: Structure, , 2004 - Wiley Online Library
     
    6. D-ribose-5-phosphate isomerase B from Escherichia coli is also a functional D-allose-6-phosphate isomerase, while the Mycobacterium tuberculosis enzyme is not
    AK Roos, S Mariano, E Kowalinski, L Salmon - Journal of molecular , 2008 - Elsevier
     
    7. Predicting and characterizing protein functions through matching geometric and evolutionary patterns of binding surfaces
    J Liang, YY Tseng, J Dundas, TA Binkowski - Advances in protein , 2008 - Elsevier
     
    8. Substrate specificity of ribose-5-phosphate isomerases from Clostridium difficile and Thermotoga maritima
    SJ Yeom, BN Kim, CS Park, DK Oh - Biotechnology letters, 2010 - Springer
     
    9. Crystal structure of Clostridium thermocellum ribose-5-phosphate isomerase B reveals properties critical for fast enzyme kinetics
    J Jung, JK Kim, SJ Yeom, YJ Ahn, DK Oh - Applied microbiology and , 2011 - Springer
     
    10. Structures of type B ribose 5_phosphate isomerase from Trypanosoma cruzi shed light on the determinants of sugar specificity in the structural family
    AL Stern, A Naworyta, JJ Cazzulo, SL Mowbray - FEBS Journal, 2011 - Wiley Online Library
     
    11. Structural and Functional Studies of Ribose-5-phosphate isomerase B
    AK Roos - 2007 - uu.diva-portal.org
     
    12. Sequence-based enzyme catalytic domain prediction using clustering and aggregated mutual information content
    K Choi, S Kim - , Imaging and Systems Biology (HISB), 2011 , 2011 - ieeexplore.ieee.org
     
    13. For Review Only
    A Naworyta, T de Chascoms, S Mowbray - FEBS Journal, 2011 - uu.diva-portal.org
     
    14. Structural characterization of a ribose-5-phosphate isomerase B from the pathogenic fungus Coccidioides immitis
    TE Edwards, AB Abramov, ER Smith - BMC structural , 2011 - biomedcentral.com
     
    15. Structure-Based Virtual Screening
    M JACOBSSON - 2008 - uu.diva-portal.org
     

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    Protein Summary


    Ligand Summary

    Reviews

    References

     

    No references found.

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