.
The Open Protein Structure Annotation Network
PDB Keyword
.

416762

    Site JCSG
    Status Crystal Structure
    Target Id
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    Molecular Characteristics
    Source
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    Alias Ids
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    TPS72088,ZP_02063319.1, 327345
    Molecular Weight
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    Da.
    Residues
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    Isoelectric Point
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    Sequence
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
      BLAST   FFAS
    Ligand Information
    Ligands
    Metals
    Google Scholar output for

    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)

    Protein Summary

    The protein ZP_02063319.1 is annotated as hypothetical protein BACOVA_00264. ZP_02063319.1 belongs to PFAM PF01833 TIG PF01436 NHL. This consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding.

     

    The monomer structure is shown below. The protein consists of two domains: the N-terminal immunoglobulin like domain and a C-terminal beta-propellar domain consisting of six beta sheets.

    SP13221C.png

     

    Top 10 DALI Structural Homologs
     
    N PDB Z-score RMSD LALI NRES %ID Description (JCSG structures highlighted in red)
    1 3tc9 51.4 6.7 420 421 45 Hypothetical Hydrolase
    2 3kya 44.1 7.5 416 471 34 Putative Phosphatase
    3 3hrp 34.2 8.6 379 400 21 Uncharacterized Protein
    4 3g4e 24.2 2.7 250 297 13 Regucalcin
    5 2p4o 24.2 2.7 249 302 13 Hypothetical Protein
    6 3g4h 24.1 2.7 250 297 13 Regucalcin
    7 2dso 23.8 2.8 258 321 11 Drp35
    8 2dg0 23.8 2.7 256 320 11 Drp35
    9 3e5z 23.7 2.5 242 290 11 Putative Gluconolactonase
    10 2dg1 23.6 2.8 256 321 12 Drp35

     

     

    A superposition of 3tc9 (magenta) on this protein (green) is shown below.

    SP13221C_3tc9.png

    Ligand Summary

    Reviews

    References

     

    No references found.

    Tag page
    • No tags

    Files (2)

    FileSizeDateAttached by 
     SP13221C.png
    No description
    132.8 kB18:16, 16 Oct 2012abhinavkActions
     SP13221C_3tc9.png
    No description
    251.1 kB18:16, 16 Oct 2012abhinavkActions
    You must login to post a comment.
    All content on this site is licensed under a Creative Commons Attribution 3.0 License
    Powered by MindTouch