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The Open Protein Structure Annotation Network
PDB Keyword
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3op7

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary

    Title Crystal structure of a PLP-dependent aminotransferase (ZP_03625122.1) from Streptococcus suis 89-1591 at 1.70 A resolution. To be published
    Site JCSG
    PDB Id 3op7 Target Id
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    Related PDB Ids 3p6k 
    Molecular Characteristics
    Source
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    Alias Ids
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    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    TPS20893,SSUI_28JUL04_CONTIG216_REVISED_GENE695, 3.40.640.10, 384320
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 1
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 2.46 Rfactor 0.1636
    Waters
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    Solvent Content 50.10

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 3op7

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    Protein Summary

    The protein

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    is an aminotransferase. It belongs to PFAM
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    . There are many structures reported in this family.

     

    The monomer structure is shown below.

    mol.png

     

    The residue Lysine 221 is covalently attached to PLP and modeled as LLP as shown above in cyan stick representation.

    Near the LLP is modeled an unknown ligand (UNL) that resembles Pyridoxamine. A zoomed view is shown below.

    unl.png

    A 2FoFc density contoured at 1 sigma above mean has been shown around the UNL.

    Ligand Summary

    Reviews

    References

     

    No references found.

    Tag page

    Files (2)

    FileSizeDateAttached by 
     mol.png
    No description
    153.27 kB19:50, 27 Aug 2010abhinavkActions
     unl.png
    No description
    208.5 kB19:50, 27 Aug 2010abhinavkActions
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