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3n6z

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary

    Title Crystal structure of a putative immunoglobulin A1 protease (BACOVA_03286) from Bacteroides ovatus at 1.30 A resolution. To be published
    Site JCSG
    PDB Id 3n6z Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS33828,ZP_02066290.1, 384458
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 1
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 2.49 Rfactor 0.135
    Waters
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    Solvent Content 50.63

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 3n6z
    1. Blind prediction of quaternary structures of homo-oligomeric proteins from amino acid sequences based on templates
    M Morita, M Kakuta, K Shimizu, S Nakamura - 2012 - hoajonline.com
     
    2. Fragment Finder 2.0: a computing server to identify structurally similar fragments
    R Nagarajan, S Siva Balan, R Sabarinathan - Journal of Applied , 2012 - scripts.iucr.org
     

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    Protein Summary

    This sequence is related to Peptidase_M26_N and Glug domains. Glug domains are often involved in adhesion. The structure consists of an unusual right-handed beta helix which has not been seen before to our knowledge, even though the structure is partial similar to other beta helical structure.

     

    The significance of matching between this protein and Glug domains has yet to be explored.

     

    Fig 1. structure of 416733

    sp13881e.png

    Ligand Summary

    Reviews

    References

     

    No references found.

    Tag page
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    Files (1)

    FileSizeDateAttached by 
     sp13881e.png
    SP13881E
    123.13 kB16:16, 19 May 2010qxuActions
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