TOPSAN > Proteins > JCSG > 3lur

3lur

Page last modified 01:44, 9 May 2012 by Admin

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Summary Discussions

1. Protein Summary
2. Ligand Summary

Molecular Characteristics
Title	Crystal structure of Putative bacterial transcription regulation protein (NP_372959.1) from Staphylococcus aureus MU50 at 1.81 A resolution. To be published
Site	JCSG
PDB Id	3lur	Target Id	reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details) Callstack: at Proteins/JCSG/3lur at Template:Protein MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
Source	reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details) Callstack: at Proteins/JCSG/3lur at Template:Protein MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details) Callstack: at Proteins/JCSG/3lur at Template:Protein MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
Alias Ids	reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details) Callstack: at Proteins/JCSG/3lur at Template:Protein MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details) Callstack: at Proteins/JCSG/3lur at Template:Protein MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details) Callstack: at Proteins/JCSG/3lur at Template:Protein MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 TPS30598,NP_372959.1, _0046.001003_, 323503	Molecular Weight	reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details) Callstack: at Proteins/JCSG/3lur at Template:Protein MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 Da.
Residues	reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details) Callstack: at Proteins/JCSG/3lur at Template:Protein MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0	Isoelectric Point	reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details) Callstack: at Proteins/JCSG/3lur at Template:Protein MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
Sequence	reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details) Callstack: at Proteins/JCSG/3lur at Template:Protein MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
	BLAST FFAS

Structure Determination
Method	XRAY reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details) Callstack: at Proteins/JCSG/3lur at Template:Protein at Template:Structure MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptSequence expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptSequence.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0	Chains	3
Resolution (Å)	reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details) Callstack: at Proteins/JCSG/3lur at Template:Protein at Template:Structure MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0	Rfree	reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details) Callstack: at Proteins/JCSG/3lur at Template:Protein at Template:Structure MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
Matthews' coefficent	2.07	Rfactor	0.176
Waters	reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details) Callstack: at Proteins/JCSG/3lur at Template:Protein at Template:Structure MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0	Solvent Content	40.65

reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)

Callstack:
    at Proteins/JCSG/3lur
    at Template:Protein
    at Template:Structure

MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown.
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0

Ligand Information
Ligands
Metals

Jmol

parameter 'target' could not convert from 'list' to 'str' (click for details)

Callstack:
    at Proteins/JCSG/3lur
    at Template:Protein
    at template

MindTouch.Deki.Script.Runtime.DekiScriptInvalidParameterCastException: parameter 'target' could not convert from 'list' to 'str'
  at MindTouch.Deki.Script.Runtime.DekiScriptParameter.Convert (MindTouch.Deki.Script.Expr.DekiScriptLiteral value) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Runtime.DekiScriptParameter.ValidateToList (MindTouch.Deki.Script.Runtime.DekiScriptParameter[] parameters, MindTouch.Deki.Script.Expr.DekiScriptList args) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Runtime.TargetInvocation.DekiScriptNativeInvocationTarget.InvokeList (MindTouch.Deki.Script.DekiScriptRuntime runtime, MindTouch.Deki.Script.Expr.DekiScriptList args) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Runtime.TargetInvocation.ADekiScriptInvocationTarget.Invoke (MindTouch.Deki.Script.DekiScriptRuntime runtime, MindTouch.Deki.Script.Expr.DekiScriptLiteral args) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.DekiScriptRuntime.Invoke (Location location, MindTouch.Dream.XUri uri, MindTouch.Deki.Script.Expr.DekiScriptLiteral args, MindTouch.Deki.Script.Runtime.DekiScriptEnv env) [0x00000] in <filename unknown>:0

Google Scholar output for 3lur
1. Predicting protein structures with a multiplayer online game
S Cooper, F Khatib, A Treuille, J Barbero, J Lee - Nature, 2010 - nature.com

2. Crystal Structure of an Integron Gene Cassette-Associated Protein from Vibrio cholerae Identifies a Cationic Drug-Binding Module
CN Deshpande, SJ Harrop, Y Boucher, KA Hassan - PloS one, 2011 - dx.plos.org

reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)

Callstack:
    at Proteins/JCSG/3lur
    at Template:Protein
    at template

MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown.
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0

reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)

Callstack:
    at Proteins/JCSG/3lur
    at Template:Protein
    at template

MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown.
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptSequence expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Expr.DekiScriptSequence.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptTernary expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Expr.DekiScriptTernary.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptSequence expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Expr.DekiScriptSequence.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0 
  at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0

Protein Summary

Gene SAV2435 from encodes the NP_372959 protein that has been determined to a resolution of 1.81 Angstroms using three-wavelength Se-MAD. The target belongs to AraC_E_bind (PF06445) Pfam A family that includes the effector binding domains of bacterial transcription regulators. This group of transcription factors regulates gene expression for proteins involved in antibiotic resistance, oxidative damage, heavy metal resistance, and inhibition of DNA gyrase.

Shown above are two ribbon representations of the 3lur structure color-coded along the amino acid sequence from blue at the N-terminus to red at the C-terminus. The orientation of the second image was obtained from the first by rotating 90 degrees counter-clockwise about a horizontal axis in the plane of the images.

Shown below is a ribbon representation of the structure of the 3lur monomer. A 2-fold pseudo-symmetry axis related many structural elements in the N and C-terminal halves of the monomer. The N-terminal half (residues 1-76) is shown in blue and the C-terminal half (residues 87-155) is shown in red. An helix-loop region between the N and C-terminal halves is shown in yellow. The pseudo two-fold is perpendicular to the plane of the image.

A DALI search reveals that 3lur has similarity to the following structures

PDB ID	DALI Z-Score	rmsd (Ang)	aligned residues	number of residues	% Sequence ID	Description
3gk6	14.9	2.7	138	153	19	Integron cassette potein VCH_CASS2 from Vibrio cholerae.
1jyh	13.9	3.3	141	155	11	E. coli Sbm C protein (AKS Gyrase Inhibitory Protein Gyr1, AKA YeeB
1d5y	13.8	2.5	138	288	17	E. coli ROB transcription factor in complex with DNA
3e0h	12.3	3.5	140	153	14	Uncharacterized protein from Chlorobium tepidum NESG target CtR107
2kcu	11.1	3.2	135	166	12	Solution NMR structure of Uncharacterized protein from Chlorobium tepidum NESG target CtR107
3d6y	10.3	3.2	127	277	10	R275E mutant of BMRR bound to DNA and berberine
3b49	9.4	3.5	132	204	9	Uncharacterized conserved protein from Listeria innocua
2gov	8.9	4.4	134	184	8	SOUL/HBP Family of Heme-binding proteins P22HBP

Shown to the left is a comparison of the structures of 3lur (green) and PDB ID 3d6y (orange), the BmrR multidrug binding transcription factor from Bacillus subtilus. A drug molecule berberine (magenta) and single-stranded DNA (yellow) are bound to the crystal structure of BmrR. A molecule of PEG bound to the crystal structure of 3lur is shown in blue. The position of the drug molecule in BmrR is similar to that of PEG in 3lur.

A PEG molecule from the crystallization was observed in the crystal structure. Shown below is a surface representation of the 3lur structure (grey). A ribbons representation of the structure is superimposed and color coded with the N-terminus in blue and the C-terminus in red. The bound PEG molecule is shown by sticks.

References

Romanowski, M.J.; Ginbey, S.A. and Burley, S.K. (2002) "Crystal Structure of the Escherichia coli SbmC Protein that Protects Cells From the DNA Replication Inhibitor Microcin B17" Proteins: Structure, Function, and Genetics" 47: 403-407.

Newberry, K.J, Huffman, J.L., Miller, M.C., Vazquez-Laslop, N., Neyfakh, A.A., and Brennan, R.G. (2008) "Structures of BmrR-Drug Complexes Reveal a Rigid Multidrup Binding Pocket and Transcription Activation through Tyrosine Explusion" J. Biol. Chem. Vol 283 No. 39, pp. 26795-26804.

Kwon, H.J., Bennik, M.H.J., Demple, B., and Ellenberger, T. (2000) "Crystal Structure of the Escherichia coli Rob Transcription Factor in Complex with DNA" Nature Structural Biology Vol. 7 Number 5 p. 424.

Dias, J.S>, Macedo, A.L., Ferreira, G.C., Peterson, F.C., Volkman, B.F., and Goodfellow, B.J. "The First Structure from the SOUL/HBP Family of Heme-binding Proteins, Murine P22HBP. (2006) J. Biol. Chem. Vol 281, Number 42, pp. 31553-31561

Ligand Summary

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MI15962B_to_3d6y.png No description	164.57 kB	22:02, 15 Jan 2010	haxelrod	Actions Attach new version Edit description Move/rename Delete
monomer_view1.png No description	125.93 kB	17:39, 14 Jan 2010	haxelrod	Actions Attach new version Edit description Move/rename Delete
monomer_view2.png No description	124.06 kB	17:39, 14 Jan 2010	haxelrod	Actions Attach new version Edit description Move/rename Delete
PEG.png No description	263.46 kB	19:51, 15 Jan 2010	haxelrod	Actions Attach new version Edit description Move/rename Delete
pseudosymmetry.png No description	133.89 kB	20:23, 14 Jan 2010	haxelrod	Actions Attach new version Edit description Move/rename Delete