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3llc

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary

    Title Crystal structure of Putative hydrolase (YP_002548124.1) from Agrobacterium vitis S4 at 1.80 A resolution. To be published
    Site JCSG
    PDB Id 3llc Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS29782,YP_002548124.1, 332810
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 1
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 3.15 Rfactor 0.160
    Waters
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    Solvent Content 60.91

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 3llc
    1. The structure of monoacylglycerol lipase from Bacillus sp. H257 reveals unexpected conservation of the cap architecture between bacterial and human enzymes
    S Rengachari, GA Bezerra, L Riegler-Berket - et Biophysica Acta (BBA , 2012 - Elsevier
     

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    Protein Summary

    Gene Avi_0199 encodes the YP_002548124 protein which belongs to the Pfam family of alpha/beta hydrolases (PF00561). Temptative SCOP classification is inside the alpha/beta class, alpha/beta hydrolases superfamily, carbon-carbon bond hydrolase family. Pfam update: Abhydrolase_1 family.

    There are strong hits in Dali with numerous esterases and lipases like 2wtm (Z-scr=27), 3jwe (Z-scr=25), 3hju (Z-scr=24). Other proteins of similar structure (Z-score=~20) as found by Dali are a hypothetical protein (PDB id 2hdw), esterases (PDB ids 1q0r, 1y7h), and a salicylic acid binding protein (PDB id 1xkl).

     

     

     

    Fig1.png 

    Ligand Summary

    Reviews

    References

     

    No references found.

    Tag page

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    360.05 kB23:26, 21 Jan 2010debanuActions
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