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The Open Protein Structure Annotation Network
PDB Keyword
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3knz

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary

    Title Crystal structure of Putative sugar binding protein (NP_459565.1) from Salmonella typhimurium LT2 at 2.50 A resolution. To be published
    Site JCSG
    PDB Id 3knz Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS20901,NP_459565.1, 3.40.50.10490, 325206
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 6
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 3.30 Rfactor 0.203
    Waters
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    Solvent Content 62.67

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 3knz
    1. Distributed structure determination at the JCSG
    H van den Bedem, G Wolf, Q Xu - Section D: Biological , 2011 - scripts.iucr.org
     

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    Protein Summary

     This protein is annotated as a putative inner membrane protein in Pfam PF01380, SIS (Sugar Isomerase) domain family.

     There are 6 protomers in the asymmetric unit of the unit cell in the crystal structure (forming 3 dimers), but crystal packing analysis and size-exclusion chromatography coupled with static light scattering support the assignment of the dimer as the significant oligomeric state in solution:

    Fig1.png

    Numerous other SIS domain protein structures have been solved at the JCSG with similar structure and highly significant FFAS scores. Their PDB ids are 3g68, 2aml, 3fj1, 3hba, 1j5x, 3eua, 3fkj and 2a3n. Very nice summary and comparisons of these structures is present in the TOPSAN pages for 3g68.pdb , 3fj1.pdb , 3hba.pdb, 3eua.pdb, and 3fkj.pdb,

    Ligand Summary

    Reviews

    References

     

    No references found.

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    507.22 kB21:12, 12 Nov 2009debanuActions
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