.
The Open Protein Structure Annotation Network
PDB Keyword
.

3bwx

Table of contents
  1. 1. Protein Summary

Title Crystal structure of an alpha/beta hydrolase (YP_496220.1) from Novosphingobium aromaticivorans DSM 12444 at 1.50 A resolution.
Site JCSG
PDB Id 3bwx Target Id 387108
Molecular Characteristics
Source Novosphingobium aromaticivorans dsm 12444
Alias Ids YP_496220.1 Molecular Weight 31466.08 Da.
Residues 284 Isoelectric Point 4.87
Sequence maeyedrywtssdglrlhfrayegdisrppvlclpgltrnardfedlatrlagdwrvlcpemrgrgdsdy akdpmtyqpmqylqdleallaqegierfvaigtslgglltmllaaanpariaaavlndvgpevspegle rirgyvgqgrnfetwmhaaralqessgdvypdwditqwlryakrimvlgssgriafdydmkiaepfeap vgatpqvdmwplfdalatrpllvlrgetsdilsaqtaakmasrpgvelvtlprighaptldepesiaai grllerv
  BLAST   FFAS

Structure Determination
Method XRAY Chains 1
Resolution (Å) 1.50 Rfree 0.203
Matthews' coefficent 2.00 Rfactor 0.161
Waters 336 Solvent Content 38.41

 

Ligand Information
Ligands EDO (1,2-ETHANEDIOL) x 14
Metals CA (CALCIUM) x 2;CL (CHLORIDE) x 2

Jmol

Protein Summary

This protein is an alpha/beta hydrolase.  It shares both sequence and structural similarity to other alpha/beta hydrolases according to BLAST (best hit to gi|87198963|ref|YP_496220.1| , E-value: 9e-147), FFAS (best hit to a haloalkane dehalogenase from a Rhodococcus species with score: -76.000, PDB code: 1bn6 ), and DALI (hits to 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (bphd) from Rhodococcus sp. strain rha1, Z-score: 23.9, RMSD: 3.1, PDB code: 1c4x and a haloalkane dehalogenase at ph 5.0 containing chloride, Z-score: 22.6, RMSD: 2.8, PDB code:1b6g).  1b6g has a catalytic triad composed of Asp124, His289, and Asp260.  The catalytic triad is conserved in this protein and is composed of: Ser105, His 265, and Asp239.

Ligand Summary



References

Reviews

References

 

No references found.

Tag page

Files (0)

 
You must login to post a comment.

ABOUT SSL CERTIFICATES
All content on this site is licensed under a Creative Commons Attribution 3.0 License