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The Open Protein Structure Annotation Network
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2r3e

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary
    3. 3. References

    Title Crystal structure of a putative kinase in the ribokinase-like superfamily from Enterococcus faecalis V583 (NP_815490.1) at 1.95 A resolution. To be published
    Site JCSG
    PDB Id 2r3e Target Id
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    Related PDB Ids 2r3b 
    Molecular Characteristics
    Source
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    Alias Ids
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    TPS1929,NP_815490.1, 3.40.1190.20, 285318
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 1
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 2.37 Rfactor 0.155
    Waters
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    Solvent Content 48.21

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 2r3e

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    Protein Summary

    The EF1790 gene (PF01256 (also related to PF02110 and PF00294), cd01171, cl00192) from Enterococcus faecalis V583 encodes the NP_815490, a putative carbohydrate kinase (EC:2.7.-.-).

    The protein structure, 2r3e, adopts a 3 layer alpha/beta/alpha sandwich, inside the alpha/beta class, ribokinase-like superfamily, YjeF C-terminal domain-like family (cf. SCOP and CATH). According to DALI structural similarity to 2r3e is presented by the uncharacterized protein 3bgk (Z=42), the TM0922 protein 2ax3 (256 equivalent residues, 1.8A rmsd, 27% sequence identity, Z=35), the carbohydrate kinase 3k5w (Z=28) and the thiazole kinase 1v8a (Z=21).

    2r3e predicted functional biomolecule is a tetramer. HHpred ranks as top hit carbohydrate kinases, further strengthening this annotation. There are various PSI-determined protein structures with similar fold, eg.  3k5w, 3dzv, 2qcv, and 2qhp.

    Ligand Summary


    References

    Reviews

    References

     

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