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1vp7

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary
    3. 3. References

    Title Crystal structure of Exodeoxyribonuclease VII small subunit E.C.3.1.11.6 (NP_881400.1) from Bordetella pertussis at 2.40 A resolution. To be published
    Site JCSG
    PDB Id 1vp7 Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS1371,NP_881400.1, 289772, 289775
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 1
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 3.75 Rfactor 0.20268
    Waters
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    Solvent Content 66.96

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 1vp7
    1. The Buccaneer software for automated model building. 1. Tracing protein chains
    K Cowtan - Acta Crystallographica Section D: Biological , 2006 - scripts.iucr.org
     
    2. Identification of two conserved aspartic acid residues required for DNA digestion by a novel thermophilic Exonuclease VII in Thermotoga maritima
    AA Larrea, IM Pedroso, A Malhotra - Nucleic acids , 2008 - Oxford Univ Press
     
    3. Delineation of structural domains and identification of functionally important residues in DNA repair enzyme exonuclease VII
    K Poleszak, KH Kaminska - Nucleic Acids , 2012 - Oxford Univ Press
     

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    Protein Summary

    The gene NP_881400.1 from Bordetella pertussis encodes exonuclease VII small subunit PF02609 EC:3.1.11.6.  The protein is an all-alpha protein with spectrin repeat-like fold type SCOP46965.  The enzyme catalyzes the exonucleolytic cleavage in either 5'->3' or 3'->5' direction to yield nucleoside 5'-phosphates. This exonuclease VII enzyme is composed of one large subunit and 4 small ones.

    Ligand Summary



    References

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