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1vl5

    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary
    3. 3. References

    Title Crystal structure of hypothetical protein (BH2331) from Bacillus halodurans at 1.95 A resolution. To be published
    Site JCSG
    PDB Id 1vl5 Target Id
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    Molecular Characteristics
    Source
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    Alias Ids
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    TPS1356,10174951, BIG_646
    Molecular Weight
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    Da.
    Residues
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    Isoelectric Point
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    Sequence
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      BLAST   FFAS

    Structure Determination
    Method XRAY
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    Chains 1
    Resolution (Å)
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    Rfree
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    Matthews' coefficent 2.64 Rfactor 0.17726
    Waters
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    Solvent Content 53.04

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    Ligand Information
    Ligands
    Metals

    Jmol

     
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    Google Scholar output for 1vl5
    1. The Buccaneer software for automated model building. 1. Tracing protein chains
    K Cowtan - Acta Crystallographica Section D: Biological , 2006 - scripts.iucr.org
     
    2. Decision-making in structure solution using Bayesian estimates of map quality: the PHENIX AutoSol wizard
    TC Terwilliger, PD Adams, RJ Read - Section D: Biological , 2009 - scripts.iucr.org
     
    3. Molecular phylogenetics and comparative modeling of HEN1, a methyltransferase involved in plant microRNA biogenesis
    K Tkaczuk, A Obarska, J Bujnicki - BMC evolutionary biology, 2006 - biomedcentral.com
     
    4. In silico analysis of methyltransferase domains involved in biosynthesis of secondary metabolites
    M Ansari, J Sharma, R Gokhale - BMC , 2008 - biomedcentral.com
     
    5. Identification of a Missing Sequence and Functionally Important Residues of 16S rRNA: m^ 1A1408 Methyltransferase KamB that Causes Bacterial Resistance to
    L Koscinski, M Feder - CELL CYCLE-LANDES , 2007 - landesbioscience.com
     

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    Protein Summary

    The gene BH2331 (10174951) from Bacillus halodurans encodes putative S-adenosylmethionine-dependent methyltransferase (SAM or AdoMet-MTase) class I.  AdoMet-MTase uses S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class, the enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).  The protein reveals fold type characteristic of UbiE/COQ5-like methyltransferase family PF01209 SCOP110671.  This protein is structurally similar to uncharacterized protein YcgJ from Bacillus subitilis 1XXL.

    Ligand Summary



    References

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