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PF11940

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF3458 PDB: 2gtq_A
    Solved by: MCSG Priority Score: 4.6
    Member of this family is in PDB.
    Member of this clan is in PDB.
    Co-occurence with annotated domain(s) (no restrictions on number of architectures).
    HMMER:
      # sequence matches: 962 # architectures: 15 # taxonomy ids:519
    FFAS:
      Top FFAS hit in PDB: "2hpoA, Aminopeptidase N" Top FFAS hit in Pfam: "PF11838, Domain of unknown function (DUF3358) "
    GRDB:
      Top significant hit (PDB90): "2hpoA, hydrolase ; structure of aminopeptidase n from e. coli suggests a compartmentalized, gated active site "
      Top significant hit (PFAM25U): "PF01347, Lipoprotein amino terminal region"
    CATH: CATH Domain E-value CATH Node
      2dq6A04 1.90E-26
      2gtqA05 6.70E-103 1.25.50.10
    FUNFAM (eval=0 ): Aminopeptidase N -like
    PUBSERVER:
      Publications(s) found: 644
      Publications(s) meeting filtering criteria: 24
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 3b34_A SCOP: predicted d.92.1 ECC: 3.4.11.2
    FFAS: PDB: 2hpo_A SCOP: predicted d.92.1 ECC: 3.4.11.2
    BLASTP: PDB: 3b34_A SCOP: predicted d.92.1 ECC: 3.4.11.2
    HHBLITS: PDB: 2gtq_A SCOP: predicted d.92.1 ECC: 3.4.11.2
    COMPASS: PDB: 2gtq_A SCOP: predicted d.92.1 ECC: 3.4.11.2
    CSBLAST: PDB: 3b34_A SCOP: predicted d.92.1 ECC: 3.4.11.2
    HHSEARCH: PDB: 3b34_A SCOP: predicted d.92.1 ECC: 3.4.11.2
    E.coli Annotations
    NCBI: 16128899 PORTECO PORAL: pepN GeneExpDB: b0932

    Topsan Members

    Tag pages as 'PF11940' to appear in this list.

    No TOPSAN member(s) found.

    Summary

    Domain linked with metalopeptidase, conserved residues linked with domain-domain interactions with the function of main catalytic domain.

    Reviews

    References

     

    No references found.

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