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PF11398

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF2813 PDB:
    Solved by: non-psi Priority Score: 2.5
    Member of this clan is in PDB.
    Co-occurence with annotated domain(s) (no restrictions on number of architectures).
    HMMER:
      # sequence matches: 1039 # architectures: 14 # taxonomy ids:547
    FFAS:
      Top FFAS hit in PDB: "3qkuA, DNA double-strand break repair rad50 ATPase" Top FFAS hit in Pfam: "PF13175, AAA ATPase domain "
    GRDB:
      Top significant hit (PDB90): "2o5vA, replication/recombination ; recombination mediator recf "
      Top significant hit (PFAM25U): "PF13175, AAA ATPase domain"
    CATH: CATH Domain E-value CATH Node
      1sgwA00 0.0053 3.40.50.300
      2awnA01 0.0035
      1qhlA00 6.50E-10 3.40.1140.10
    FUNFAM (eval=0 ): ATPase WRNIP1 -like
    PUBSERVER:
      Publications(s) found: 1282
      Publications(s) meeting filtering criteria: 54
    GeneSilico Metaserver: (Login and password: Jamboree)
    PHYRE: PDB: 1e69_A SCOP: c.37.1.12 ECC: predicted 3.6.-.-
    MGENTHREADER: PDB: 1e69_A SCOP: c.37.1.12 ECC: predicted 3.6.-.-
    SPARKS: PDB: 1e69_A SCOP: c.37.1.12 ECC: predicted 3.6.-.-
    HHBLITS: PDB: 1s96_A SCOP: c.37.1.1 ECC: 2.7.4.8
    COMPASS: PDB: 2o5v_A SCOP: predicted c.37.1
    CSBLAST: PDB: 2it1_A SCOP: predicted c.37.1 ECC: predicted 3.6.-.-
    HHSEARCH: PDB: 1e69_A SCOP: c.37.1.12 ECC: predicted 3.6.-.-
    E.coli Annotations
    NCBI: 16128844 PORTECO PORAL: ybjD GeneExpDB: b0876

    Topsan Members

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    Summary

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