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PF09413

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF2007 PDB: 2hfv_A
    Solved by: NESG Priority Score: 4.6
    Member of this family is in PDB.
    Member of this clan is in PDB.
    Co-occurence with annotated domain(s) (no restrictions on number of architectures).
    HMMER:
      # sequence matches: 718 # architectures: 12 # taxonomy ids:432
    FFAS:
      Top FFAS hit in PDB: "2hfvA, Hypothetical Protein RPA1041" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "2hfvA, structural genomics, unknown function ; solution nmr structure of pseudomonas aeruginosa hypothetical protein rpa1041: northeast structural genomics consortium target pat90 "
    CATH: CATH Domain E-value CATH Node
      2hfvA01 1.30E-13 3.30.70.790
    PUBSERVER:
      Publications(s) found: 68
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver: (Login and password: Jamboree)
    PHYRE: PDB: 2hfv_A SCOP: predicted d.58.18.10
    MGENTHREADER: PDB: 2hfv_A SCOP: predicted d.58.18.10
    HHBLITS: PDB: 2hfv_A SCOP: predicted d.58.18.10
    COMPASS: PDB: 2hfv_A SCOP: predicted d.58.18.10
    HHSEARCH: PDB: 2hfv_A SCOP: predicted d.58.18.10

    Topsan Members

    Tag pages as 'PF09413' to appear in this list.

    Name Annotation Author(s)
    2hfv

    Summary

    Pfam family PFAM:PF09413 {Protein of unknown function (DUF2007) } with 121 members in NR database and additional 90 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id: TOPSAN:2hfv) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1eara2 classified as Ferredoxin-like fold. Based on indirect marginal prediction from FFAS then confirmed by structural similarity one can argue that this family is remotely homologous to previously known structures from 'd1eara2' this fold.

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