.
The Open Protein Structure Annotation Network
PDB Keyword
.

PF09407

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

    HTTP Status: UnableToConnect(0) (click for details)
    HTTP Status: UnableToConnect(0) (click for details)
      

    Resources
    Pfam ID: DUF2005 PDB: 1zel_A
    Solved by: TBSGC Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 9 # architectures: 2 # taxonomy ids:4
    FFAS:
      Top FFAS hit in PDB: "1zelA, hypothetical protein Rv2827c" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "1zelA, structural genomics, unknown function ; crystal structure of rv2827c protein from mycobacterium tuberculosis "
    CATH: CATH Domain E-value CATH Node
      1zelB01 3.60E-34
    PUBSERVER:
      Publications(s) found: 24
      Publications(s) meeting filtering criteria: 1
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 1zel_A SCOP: predicted a.4.5.39
    FFAS: PDB: 1zel_A SCOP: predicted a.4.5.39
    MGENTHREADER: PDB: 1zel_A SCOP: predicted a.4.5.39
    BLASTP: PDB: 1zel_A SCOP: predicted a.4.5.39
    HHBLITS: PDB: 1zel_A SCOP: predicted a.4.5.39
    COMPASS: PDB: 1zel_A SCOP: predicted a.4.5.39
    CSBLAST: PDB: 1zel_A SCOP: predicted a.4.5.39
    HHSEARCH: PDB: 1zel_A SCOP: predicted a.4.5.39

    Topsan Members

    Tag pages as 'PF09407' to appear in this list.

    Name Annotation Author(s)
    1zel

    Summary

    Pfam family PFAM:PF09407 {Protein of unknown function (DUF2005) } with 8 members in NR database. The first structural representative solved (PDB Id: TOPSAN:1zel) was subject to FATCAT structural similarity search that yielded no results, thus suggesting that it is a novel fold. Based on structure - N-terminal domain has fold of DNA/RNA-binding 3-helical bundle one can hypothesize that this family is probably binds nucleic acids

    Reviews

    References

     

    No references found.

    Tag page

    Files (0)

     
    You must login to post a comment.
    All content on this site is licensed under a Creative Commons Attribution 3.0 License
    Powered by MindTouch