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The Open Protein Structure Annotation Network
PDB Keyword
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PF09234

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1963 PDB: 1pv5_A
    Solved by: MCSG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 468 # architectures: 10 # taxonomy ids:174
    FFAS:
      Top FFAS hit in PDB: "1pv5A, Hypothetical protein ywqG" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "1pv5A, structural genomics, unknown function ; structure of hypothetical protein ywqg from bacillus subtilis "
    CATH: CATH Domain E-value CATH Node
      1pv5A00 0.0019 2.30.320.10
    PUBSERVER:
      Publications(s) found: 175
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 1pv5_A SCOP: d.251.1.1 ECC: predicted 2.8.-.-
    FFAS: PDB: 1pv5_A SCOP: d.251.1.1 ECC: predicted 2.8.-.-
    MGENTHREADER: PDB: 1pv5_A SCOP: d.251.1.1 ECC: predicted 2.8.-.-
    PRC: PDB: 1pv5_A SCOP: d.251.1.1 ECC: predicted 2.8.-.-
    SPARKS: PDB: 1pv5_A SCOP: d.251.1.1 ECC: predicted 2.8.-.-
    BLASTP: PDB: 1pv5_A SCOP: d.251.1.1 ECC: predicted 2.8.-.-
    HHBLITS: PDB: 1pv5_A SCOP: d.251.1.1 ECC: predicted 2.8.-.-
    COMPASS: PDB: 1pv5_A SCOP: d.251.1.1 ECC: predicted 2.8.-.-
    CSBLAST: PDB: 1pv5_A SCOP: d.251.1.1 ECC: predicted 2.8.-.-
    HHSEARCH: PDB: 1pv5_A SCOP: d.251.1.1 ECC: predicted 2.8.-.-

    Topsan Members

    Tag pages as 'PF09234' to appear in this list.

    Name Annotation Author(s)
    1pv5

    Summary

    Pfam family PFAM:PF09234 {Domain of unknown function (DUF1963)} with 82 members in NR database and additional 9 members in the metagenomic datasets is represented in Bacteria, and Eukaryota. The first structural representative solved (PDB Id: TOPSAN:1pv5) was subject to FATCAT structural similarity search that yielded no results, thus suggesting that it is a novel fold.

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