.
The Open Protein Structure Annotation Network
PDB Keyword
.

PF09187

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    3. 3. References

    HTTP Status: UnableToConnect(0) (click for details)
    HTTP Status: UnableToConnect(0) (click for details)
      

    Resources
    Pfam ID: DUF1950 PDB: 1vk5_A
    Solved by: CESG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 12 # architectures: 1 # taxonomy ids:9
    FFAS:
      Top FFAS hit in PDB: "1vk5A, expressed protein" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "1vk5A, structural genomics, unknown function ; x-ray structure of gene product from arabidopsis thaliana at3g22680 "
    CATH: CATH Domain E-value CATH Node
      1vk5A00 1.10E-56
    PUBSERVER:
      Publications(s) found: 13
      Publications(s) meeting filtering criteria: 2
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 2q3t_A SCOP: predicted a.220.1.1
    FFAS: PDB: 1vk5_A SCOP: a.220.1.1
    MGENTHREADER: PDB: 2q3t_A SCOP: predicted a.220.1.1
    PRC: PDB: 1vk5_A SCOP: a.220.1.1
    SPARKS: PDB: 1vk5_A SCOP: a.220.1.1
    BLASTP: PDB: 2q3t_A SCOP: predicted a.220.1.1
    HHBLITS: PDB: 1vk5_A SCOP: a.220.1.1
    COMPASS: PDB: 1vk5_A SCOP: a.220.1.1
    CSBLAST: PDB: 2q3t_A SCOP: predicted a.220.1.1
    HHSEARCH: PDB: 1vk5_A SCOP: a.220.1.1

    Topsan Members

    Tag pages as 'PF09187' to appear in this list.

    Name Annotation Author(s)
    1vk5

    Summary

    Pfam family PFAM:PF09187 {Domain of unknown function(DUF1950) } with 8 members in NR database. The first structural representative solved (PDB Id: TOPSAN:1vk5) was subject to FATCAT structural similarity search that yielded no results, thus suggesting that it is a novel fold.

    Reviews

    References

     

    No references found.

    Tag page

    Files (0)

     
    You must login to post a comment.
    All content on this site is licensed under a Creative Commons Attribution 3.0 License
    Powered by MindTouch