The Open Protein Structure Annotation Network
PDB Keyword


    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    3. 3. References

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    Pfam ID: DUF1936 PDB: 1pvm_A
    Solved by: MCSG Priority Score: 2.6
    Member of this family is in PDB.
    Member of this clan is in PDB.
      # sequence matches: 2 # architectures: 1 # taxonomy ids:2
      No significant hits in PDB. No significant hits in Pfam.
      Publications(s) found: 3
      Publications(s) meeting filtering criteria: 1

    Topsan Members

    Tag pages as 'PF09151' to appear in this list.

    Name Annotation Author(s)


    Pfam family PFAM:PF09151 {Domain of unknown function (DUF1936)} with 2 members in NR database and additional 1 members in the metagenomic datasets is represented in Archaea. The first structural representative solved (PDB Id: TOPSAN:1pvm) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1ffkw_ classified as Rubredoxin-like fold. Based on marginal prediction from FFAS confirmed by structural similarity one can argue that this family is remotely homologous to previously known structures from 'd1ffkw_' this fold. Based on experiment/ original paper one can hypothesize that this family is electron transport protein




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