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PF08989

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)

    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
      

    Resources
    Pfam ID: DUF1896 PDB: 2apl_A
    Solved by: MCSG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 209 # architectures: 1 # taxonomy ids:64
    FFAS:
      Top FFAS hit in PDB: "2aplA, hypothetical protein PG0816" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "2aplA, structural genomics, unknown function ; crystal structure of protein pg0816 from porphyromonas gingivalis "
    CATH: CATH Domain E-value CATH Node
      2aplA01 3.80E-20 1.10.8.330
      2aplA02 1.70E-25 1.10.8.340
    PUBSERVER:
      Publications(s) found: 11
      Publications(s) meeting filtering criteria: 2
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 2apl_A SCOP: predicted a.258.1.1
    FFAS: PDB: 2apl_A SCOP: predicted a.258.1.1
    MGENTHREADER: PDB: 2apl_A SCOP: predicted a.258.1.1
    PRC: PDB: 2apl_A SCOP: predicted a.258.1.1
    BLASTP: PDB: 2apl_A SCOP: predicted a.258.1.1
    HHBLITS: PDB: 2apl_A SCOP: predicted a.258.1.1
    COMPASS: PDB: 2apl_A SCOP: predicted a.258.1.1
    CSBLAST: PDB: 2apl_A SCOP: predicted a.258.1.1
    HHSEARCH: PDB: 2apl_A SCOP: predicted a.258.1.1

    Topsan Members

    Tag pages as 'PF08989' to appear in this list.

    Name Annotation Author(s)
    2apl

    Summary

    Pfam family
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    {Domain of unknown function (DUF1896) } with 9 members in NR database and additional 3 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id:
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    ) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    classified as PG0816-like fold. (Note: new fold solved by PSI). However, this partial similarity is not sufficient for fold assignment. Thus it is a novel fold.

    Reviews

    References

     

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