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The Open Protein Structure Annotation Network
PDB Keyword
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PF08986

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1889 PDB: 2es9_A
    Solved by: NESG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 64 # architectures: 1 # taxonomy ids:20
    FFAS:
      Top FFAS hit in PDB: "2es9A, putative cytoplasmic protein" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "2es9A, structural genomics, unknown function ; crystal structure of q8zrj2 from salmonella typhimurium. nesg target str65 "
    CATH: CATH Domain E-value CATH Node
      2es9A00 1.70E-44
    PUBSERVER:
      Publications(s) found: 206
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 2es9_A SCOP: predicted a.247.1.1
    FFAS: PDB: 2es9_A SCOP: predicted a.247.1.1
    MGENTHREADER: PDB: 2es9_A SCOP: predicted a.247.1.1
    PRC: PDB: 2es9_A SCOP: predicted a.247.1.1
    BLASTP: PDB: 2es9_A SCOP: predicted a.247.1.1
    HHBLITS: PDB: 2es9_A SCOP: predicted a.247.1.1
    COMPASS: PDB: 2es9_A SCOP: predicted a.247.1.1
    CSBLAST: PDB: 2es9_A SCOP: predicted a.247.1.1
    HHSEARCH: PDB: 2es9_A SCOP: predicted a.247.1.1
    E.coli Annotations
    NCBI: 226524724 PORTECO PORAL: yoaC GeneExpDB: b1810

    Topsan Members

    Tag pages as 'PF08986' to appear in this list.

    Name Annotation Author(s)
    2es9

    Summary

    Pfam family PFAM:PF08986 {Domain of unknown function (DUF1889) } with 23 members in NR database and additional 1 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id: TOPSAN:2es9) was subject to FATCAT structural similarity search that yielded no results, thus suggesting that it is a novel fold.

    Reviews

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