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PDB Keyword
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PF08968

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1885 PDB: 1t6a_A
    Solved by: MCSG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 52 # architectures: 1 # taxonomy ids:19
    FFAS:
      Top FFAS hit in PDB: "1t6aA, RBSTP2229 gene product" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "1t6aA, structural genomics, unknown function ; x-ray crystal structure of hypothetical protein from bacillus stearothermophilus "
    CATH: CATH Domain E-value CATH Node
      1t6aA02 9.00E-29 3.30.310.120
      1t6aA01 4.80E-13 1.20.5.850
    PUBSERVER:
      Publications(s) found: 17
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 1t6a_A SCOP: d.129.8.1
    FFAS: PDB: 1t6a_A SCOP: d.129.8.1
    MGENTHREADER: PDB: 1t6a_A SCOP: d.129.8.1
    PRC: PDB: 1t6a_A SCOP: d.129.8.1
    SPARKS: PDB: 1t6a_A SCOP: d.129.8.1
    BLASTP: PDB: 1t6a_A SCOP: d.129.8.1
    HHBLITS: PDB: 1t6a_A SCOP: d.129.8.1
    COMPASS: PDB: 1t6a_A SCOP: d.129.8.1
    COMA: PDB: 1t6a_A SCOP: d.129.8.1
    CSBLAST: PDB: 1t6a_A SCOP: d.129.8.1
    HHSEARCH: PDB: 1t6a_A SCOP: d.129.8.1

    Topsan Members

    Tag pages as 'PF08968' to appear in this list.

    Name Annotation Author(s)
    1t6a

    Summary

    Pfam family PFAM:PF08968 {Domain of unknown function (DUF1885) } with 11 members in NR database. The first structural representative solved (PDB Id: TOPSAN:1t6a) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1v5sa_ classified as TBP-like fold. However, no sequence similarity to this fold has been detected.

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