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PDB Keyword
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PF08966

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1882 PDB: 2atz_A
    Solved by: MCSG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 51 # architectures: 1 # taxonomy ids:30
    FFAS:
      Top FFAS hit in PDB: "2atzA, H. pylori predicted coding region HP0184" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "2atzA, structural genomics, unknown function ; crystal structure of protein hp0184 from helicobacter pylori "
    CATH: CATH Domain E-value CATH Node
      2atzA00 1.10E-28 3.90.920.20
    PUBSERVER:
      Publications(s) found: 41
      Publications(s) meeting filtering criteria: 1
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 2atz_A SCOP: d.264.1.3
    FFAS: PDB: 2atz_A SCOP: d.264.1.3
    MGENTHREADER: PDB: 2atz_A SCOP: d.264.1.3
    PRC: PDB: 2atz_A SCOP: d.264.1.3
    BLASTP: PDB: 2atz_A SCOP: d.264.1.3
    HHBLITS: PDB: 2atz_A SCOP: d.264.1.3
    COMPASS: PDB: 2atz_A SCOP: d.264.1.3
    CSBLAST: PDB: 2atz_A SCOP: d.264.1.3
    HHSEARCH: PDB: 2atz_A SCOP: d.264.1.3

    Topsan Members

    Tag pages as 'PF08966' to appear in this list.

    Name Annotation Author(s)
    2atz

    Summary

    Pfam family PFAM:PF08966 {Domain of unknown function (DUF1882) } with 16 members in NR database. The first structural representative solved (PDB Id: TOPSAN:2atz) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1v33a_ classified as Prim-pol domain fold. Based on Ligand one can argue that this family is remotely homologous to previously known structures from 'd1v33a_' this fold.

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