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The Open Protein Structure Annotation Network
PDB Keyword
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PF08963

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1878 PDB: 1sed_A
    Solved by: MCSG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 60 # architectures: 1 # taxonomy ids:23
    FFAS:
      Top FFAS hit in PDB: "1sedA, Hypothetical protein yhaI" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "1sedA, structural genomics, unknown function ; crystal structure of hypothetical protein yhai, apc1180 from bacillus subtilis "
    CATH: CATH Domain E-value CATH Node
      1sedA00 4.80E-39 1.10.3750.10
    PUBSERVER:
      Publications(s) found: 42
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 1sed_A SCOP: a.219.1.1
    FFAS: PDB: 1sed_A SCOP: a.219.1.1
    MGENTHREADER: PDB: 1sed_A SCOP: a.219.1.1
    PRC: PDB: 1sed_A SCOP: a.219.1.1
    SPARKS: PDB: 1sed_A SCOP: a.219.1.1
    BLASTP: PDB: 1sed_A SCOP: a.219.1.1
    HHBLITS: PDB: 1sed_A SCOP: a.219.1.1
    COMPASS: PDB: 1sed_A SCOP: a.219.1.1
    COMA: PDB: 1sed_A SCOP: a.219.1.1
    CSBLAST: PDB: 1sed_A SCOP: a.219.1.1
    HHSEARCH: PDB: 1sed_A SCOP: a.219.1.1

    Topsan Members

    Tag pages as 'PF08963' to appear in this list.

    Name Annotation Author(s)
    1sed

    Summary

    Pfam family PFAM:PF08963 {Protein of unknown function (DUF1878) } with 17 members in NR database. The first structural representative solved (PDB Id: TOPSAN:1sed) was subject to FATCAT structural similarity search that yielded no results, thus suggesting that it is a novel fold.

    Reviews

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