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PF08958

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1871 PDB: 1u84_A
    Solved by: MCSG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 77 # architectures: 3 # taxonomy ids:41
    FFAS:
      Top FFAS hit in PDB: "3r2xC, HB36.3, designed hemagglutinin binding protei" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "1u84A, structural genomics, unknown function ; crystal structure of apc36109 from bacillus stearothermophilus "
    CATH: CATH Domain E-value CATH Node
      1u84A00 2.00E-28 1.10.340.20
    PUBSERVER:
      Publications(s) found: 43
      Publications(s) meeting filtering criteria: 1
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 1u84_A SCOP: a.230.1.1
    FFAS: PDB: 1u84_A SCOP: a.230.1.1
    MGENTHREADER: PDB: 1u84_A SCOP: a.230.1.1
    PRC: PDB: 1u84_A SCOP: a.230.1.1
    SPARKS: PDB: 1u84_A SCOP: a.230.1.1
    BLASTP: PDB: 1u84_A SCOP: a.230.1.1
    HHBLITS: PDB: 1u84_A SCOP: a.230.1.1
    COMPASS: PDB: 1u84_A SCOP: a.230.1.1
    COMA: PDB: 1u84_A SCOP: a.230.1.1
    CSBLAST: PDB: 1u84_A SCOP: a.230.1.1
    HHSEARCH: PDB: 1u84_A SCOP: a.230.1.1

    Topsan Members

    Tag pages as 'PF08958' to appear in this list.

    Name Annotation Author(s)
    1u84

    Summary

    Pfam family PFAM:PF08958 {Domain of unknown function (DUF1871) } with 16 members in NR database. The first structural representative solved (PDB Id: TOPSAN:1u84) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1ngna_ classified as Yuge-like fold. (Note: new fold solved by PSI). However, this partial similarity is not sufficient for fold assignment. Thus it is a novel fold.

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