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PF08952

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1866 PDB: 1ufw_A
    Solved by: RSGI Priority Score: 4.6
    Member of this family is in PDB.
    Member of this clan is in PDB.
    Co-occurence with annotated domain(s) in one architecture.
    HMMER:
      # sequence matches: 83 # architectures: 6 # taxonomy ids:42
    FFAS:
      Top FFAS hit in PDB: "2dnrA, Synaptojanin-1" Top FFAS hit in Pfam: "PF04847, Calcipressin "
    GRDB:
      Top significant hit (PDB90): "2dnrA, rna binding protein ; solution structure of rna binding domain in synaptojanin 1 "
      Top significant hit (PFAM25U): "PF05172, Nup53/35/40-type RNA recognition motif"
    CATH: CATH Domain E-value CATH Node
      3h2uB01 0.0095
      1welA00 0.0098 3.30.70.330
    FUNFAM (eval=0 ): Multicopy suppressor of sporulation protein msa1 domain 2 -like
    PUBSERVER:
      Publications(s) found: 118
      Publications(s) meeting filtering criteria: 54
    GeneSilico Metaserver: (Login and password: Jamboree)
    FFAS: PDB: 2dnr_A SCOP: predicted d.58.7.1 ECC: 3.1.3.36
    PHYRE: PDB: 1x4g_A SCOP: d.58.7.1 ECC: predicted 2.1.-.-
    MGENTHREADER: PDB: 2dnr_A SCOP: predicted d.58.7.1 ECC: 3.1.3.36
    PRC: PDB: 1ufw_A SCOP: d.58.7.1 ECC: 3.1.3.36
    SPARKS: PDB: 1ufw_A SCOP: d.58.7.1 ECC: 3.1.3.36
    HHBLITS: PDB: 2dgt_A SCOP: predicted d.58.7.1 ECC: predicted 2.1.-.-
    COMPASS: PDB: 2dnr_A SCOP: predicted d.58.7.1 ECC: 3.1.3.36
    HHSEARCH: PDB: 2dnr_A SCOP: predicted d.58.7.1 ECC: 3.1.3.36

    Topsan Members

    Tag pages as 'PF08952' to appear in this list.

    No TOPSAN member(s) found.

    Summary

     RNA-binding  domain of the RRM supfamily found in Synaptojanin-like nuclease domains. Proposed Pfam id: RRM_7.

     

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