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PF08937

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1863 PDB: 3hyn_A
    Solved by: JCSG Priority Score: 3.6
    Member of this family is in PDB.
    Member of this clan is in PDB.
    Co-occurence with annotated domain(s) (no restrictions on number of architectures).
    HMMER:
      # sequence matches: 384 # architectures: 37 # taxonomy ids:233
    FFAS:
      Top FFAS hit in PDB: "3hynA, Putative signal transduction protein" Top FFAS hit in Pfam: "PF01582, TIR domain "
    GRDB:
      Top significant hit (PDB90): "3h16A, signaling protein ; crystal structure of a bacteria tir domain, pdtir from paracoccus denitrificans "
      Top significant hit (PFAM25U): "PF13676, TIR domain"
    CATH: CATH Domain E-value CATH Node
      2khzA00 0.0012
      3ehdA00 0.0027 3.40.50.1810
      1eiwA00 2.60E-11 3.40.50.9200
      1t3gB00 5.20E-05 3.40.50.10140
    FUNFAM (eval=0.000054 ): Interleukin-1 receptor accessory protein-like 1-B -like
    PUBSERVER:
      Publications(s) found: 181
      Publications(s) meeting filtering criteria: 13
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 3hyn_A ECC: predicted 3.1.-.-
    PRC: PDB: 1eiw_A SCOP: c.23.3.1
    HHBLITS: PDB: 1fyx_A SCOP: c.23.2.1
    COMPASS: PDB: 1fyw_A SCOP: c.23.2.1
    HHSEARCH: PDB: 3hyn_A ECC: predicted 3.1.-.-

    Topsan Members

    Tag pages as 'PF08937' to appear in this list.

    Name Annotation Author(s)
    3hyn
    The EUBREC_0645 gene translates into the YP_002936568 protein from Eubacterium rectale, the most abundant member of Firmicutes phyla in the human gut, and it is the first solved representative of the ... qxu (10 edits)
    pascual (4 edits)
    krishna (1 edits)

    Summary

    Your annotation here.

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