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PF08854

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Pfam ID: DUF1824 PDB: 2q22_A
    Solved by: JCSG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 64 # architectures: 2 # taxonomy ids:32
    FFAS:
      Top FFAS hit in PDB: "2q22A, Uncharacterized protein" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "2q22A, structural genomics, unknown function ; crystal structure of uncharacterized protein (yp_323524.1) from anabaena variabilis atcc 29413 at 2.11 a resolution "
    CATH: CATH Domain E-value CATH Node
      2q22A00 1.20E-36 3.30.360.10
    PUBSERVER:
      Publications(s) found: 32
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 2q22_A
    FFAS: PDB: 2q22_A
    MGENTHREADER: PDB: 2q22_A
    BLASTP: PDB: 2q22_A
    HHBLITS: PDB: 2q22_A
    COMPASS: PDB: 2q22_A
    CSBLAST: PDB: 2q22_A
    HHSEARCH: PDB: 2q22_A

    Topsan Members

    Tag pages as 'PF08854' to appear in this list.

    Name Annotation Author(s)
    2q22
    YP_323524 protein structure from Anabaena variabilis atcc 29413 is the product of the Ava_3019 gene and belongs to a family with unknown function. The structure adopts an alpha+beta fold. Its PFAM ide... chrisx (4 edits)
    pascual (3 edits)

    Summary

    Pfam family PFAM:PF08854 {Domain of unknown function (DUF1824)} with 135 members in NR database and additional 106 members in the metagenomic datasets is represented in Bacteria, and Eukaryota. The first structural representative solved (PDB Id: TOPSAN:2q22) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1vm6a2 classified as Fwde/GAPDH domain-like fold. However, no sequence similarity to this fold has been detected.

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