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PF08827

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1805 PDB: 1qw2_A
    Solved by: MCSG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 123 # architectures: 2 # taxonomy ids:78
    FFAS:
      Top FFAS hit in PDB: "1qw2A, conserved hypothetical protein TA1206" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "1qw2A, structural genomics, unknown function ; crystal structure of a hypothetical protein ""ta1206"" from thermoplasma acidophilum "
    CATH: CATH Domain E-value CATH Node
      1qw2A00 1.80E-20 3.30.1980.10
    PUBSERVER:
      Publications(s) found: 73
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 1qw2_A SCOP: d.249.1.1
    FFAS: PDB: 1qw2_A SCOP: d.249.1.1
    PRC: PDB: 1qw2_A SCOP: d.249.1.1
    HHBLITS: PDB: 1qw2_A SCOP: d.249.1.1
    COMPASS: PDB: 1qw2_A SCOP: d.249.1.1
    CSBLAST: PDB: 1qw2_A SCOP: d.249.1.1
    HHSEARCH: PDB: 1qw2_A SCOP: d.249.1.1

    Topsan Members

    Tag pages as 'PF08827' to appear in this list.

    Name Annotation Author(s)
    1qw2

    Summary

    Pfam family PFAM:PF08827 {Domain of unknown function (DUF1805)} with 36 members in NR database and additional 3 members in the metagenomic datasets is represented in Archaea, and Bacteria. The first structural representative solved (PDB Id: TOPSAN:1qw2) was subject to FATCAT structural similarity search that yielded no results, thus suggesting that it is a novel fold.

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