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PF08807

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1798 PDB: 2ets_A
    Solved by: JCSG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 108 # architectures: 1 # taxonomy ids:53
    FFAS:
      Top FFAS hit in PDB: "2hfiA, Hypothetical protein yppE" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "2hfiA, structural genomics, unknown function ; solution nmr structure of hypothetical protein yppe: northeast structural genomics consortium target sr213 "
    CATH: CATH Domain E-value CATH Node
      2etsA00 2.40E-39
      2im8A00 3.10E-42 1.20.120.440
    PUBSERVER:
      Publications(s) found: 120
      Publications(s) meeting filtering criteria: 3
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 2im8_A SCOP: a.24.26.1
    FFAS: PDB: 2hfi_A SCOP: predicted a.24.26.1
    PRC: PDB: 2huj_A SCOP: predicted a.24.26.1
    BLASTP: PDB: 2ets_A SCOP: predicted a.24.26.1
    HHBLITS: PDB: 2hfi_A SCOP: predicted a.24.26.1
    COMPASS: PDB: 2ets_A SCOP: predicted a.24.26.1
    COMA: PDB: 2hfi_A SCOP: predicted a.24.26.1
    CSBLAST: PDB: 2im8_A SCOP: a.24.26.1
    HHSEARCH: PDB: 2hfi_A SCOP: predicted a.24.26.1

    Topsan Members

    Tag pages as 'PF08807' to appear in this list.

    Name Annotation Author(s)
    2ets
    The MW1337 gene of Staphylococcus aureus subsp. aureus MW2 encodes the NP_646154 protein from the DUF1798 family present only in bacteria (Pfam accession number PF08807). Analysis of the genomic neigh... pascual (7 edits)
    chrisx (2 edits)

    Summary

    Pfam family PFAM:PF08807 {Bacterial domain of unknown function (DUF1798)} with 41 members in NR database. The first structural representative solved (PDB Id: TOPSAN:2ets) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1tqga_ classified as Four-helical up-and-down bundle fold. However, no sequence similarity to this fold has been detected.

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