.
The Open Protein Structure Annotation Network
PDB Keyword
.

PF08538

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

    HTTP Status: UnableToConnect(0) (click for details)
    HTTP Status: UnableToConnect(0) (click for details)
      

    Resources
    Pfam ID: DUF1749 PDB: 2q0x_A
    Solved by: SGPP Priority Score: 2.6
    Member of this family is in PDB.
    Member of this clan is in PDB.
    HMMER:
      # sequence matches: 192 # architectures: 8 # taxonomy ids:126
    FFAS:
      Top FFAS hit in PDB: "2q0xA, Uncharacterized protein" Top FFAS hit in Pfam: "PF12697, Alpha/beta hydrolase family "
    GRDB:
      Top significant hit (PDB90): "2q0xA, structural genomics, unknown function ; alpha/beta hydrolase fold protein of unknown function "
      Top significant hit (PFAM25U): "PF06500, Alpha/beta hydrolase of unknown function (DUF1100)"
    CATH: CATH Domain E-value CATH Node
      1ycdB00 0.0074
      3bixA00 0.0073 3.40.50.1820
    FUNFAM (eval=0 ): UPF0613 protein PB24D3.06c -like
    PUBSERVER:
      Publications(s) found: 1178
      Publications(s) meeting filtering criteria: 78
    GeneSilico Metaserver: (Login and password: Jamboree)
    FFAS: PDB: 2q0x_A SCOP: predicted c.69.1.11 ECC: predicted 2.8.-.-
    PHYRE: PDB: 2q0x_A SCOP: predicted c.69.1.11 ECC: predicted 2.8.-.-
    MGENTHREADER: PDB: 2q0x_A SCOP: predicted c.69.1.11 ECC: predicted 2.8.-.-
    PRC: PDB: 1mpx_A SCOP: predicted c.69.1 ECC: 3.1.1.43
    HHBLITS: PDB: 1iup_A SCOP: c.69.1.10 ECC: 3.7.1.9
    COMPASS: PDB: 2q0x_A SCOP: predicted c.69.1.11 ECC: predicted 2.8.-.-
    HHSEARCH: PDB: 2q0x_A SCOP: predicted c.69.1.11 ECC: predicted 2.8.-.-

    Topsan Members

    Tag pages as 'PF08538' to appear in this list.

    Name Annotation Author(s)
    2q0x

    Summary

    Pfam family PFAM:PF08538 {Protein of unknown function (DUF1749)} with 77 members in NR database and additional 9 members in the metagenomic datasets is represented in Bacteria, and Eukaryota. The first structural representative solved (PDB Id: TOPSAN:2q0x) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1tqha_ classified as Alpha/beta hydrolase fold. Profile-profile methods confirm remote homology between this family and superfamily of alpha/beta hydrolase; fold of the same name.

    Reviews

    References

     

    No references found.

    Tag page

    Files (0)

     
    You must login to post a comment.
    All content on this site is licensed under a Creative Commons Attribution 3.0 License
    Powered by MindTouch