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PF08338

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1731 PDB: 3oh8_A
    Solved by: NESG Priority Score: 4.6
    Member of this family is in PDB.
    Co-occurence with annotated domain(s) (no restrictions on number of architectures).
    HMMER:
      # sequence matches: 1197 # architectures: 12 # taxonomy ids:670
    FFAS:
      Top FFAS hit in PDB: "3oh8A, Nucleoside-diphosphate sugar epimerase (SulA" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "3oh8A, isomerase ; crystal structure of the nucleoside-diphosphate sugar epimerase from corynebacterium glutamicum. northeast structural genomics consortium target cgr91 "
    CATH: CATH Domain E-value CATH Node
      3gpiA00 0.0059
    PUBSERVER:
      Publications(s) found: 851
      Publications(s) meeting filtering criteria: 3
    GeneSilico Metaserver: (Login and password: Jamboree)
    HHBLITS: PDB: 2c20_A SCOP: predicted c.2.1.2 ECC: 5.1.3.2
    HHSEARCH: PDB: 3oh8_A SCOP: predicted c.2.1 ECC: predicted 1.1.-.-
    E.coli Annotations
    NCBI: 16130239 PORTECO PORAL: yfcH GeneExpDB: b2304

    Topsan Members

    Tag pages as 'PF08338' to appear in this list.

    No TOPSAN member(s) found.

    Summary

    This DUF is an extension of the epimerase domain.  Either the epimerase domain should be extend to include this regions, or the DUF should be extended to cover the epimerase domain, and be included in the clan.  Failing that, kill the DUF - agreed by Rob and Aravind.

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