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The Open Protein Structure Annotation Network
PDB Keyword
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PF07408

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1507 PDB: 2gbo_A
    Solved by: MCSG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 109 # architectures: 1 # taxonomy ids:74
    FFAS:
      Top FFAS hit in PDB: "2odmA, UPF0358 protein MW0995" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "2gboA, structural genomics, unknown function ; hypothetical protein ef_2458 from enterococcus faecalis. "
    CATH: CATH Domain E-value CATH Node
      2gboA00 8.80E-30 1.10.287.750
    PUBSERVER:
      Publications(s) found: 132
      Publications(s) meeting filtering criteria: 2
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 2odm_A SCOP: predicted a.23.6.1
    FFAS: PDB: 2gbo_A SCOP: predicted a.23.6.1
    PRC: PDB: 2gbo_A SCOP: predicted a.23.6.1
    BLASTP: PDB: 2odm_A SCOP: predicted a.23.6.1
    HHBLITS: PDB: 2odm_A SCOP: predicted a.23.6.1
    COMPASS: PDB: 2odm_A SCOP: predicted a.23.6.1
    COMA: PDB: 2gbo_A SCOP: predicted a.23.6.1
    CSBLAST: PDB: 2odm_A SCOP: predicted a.23.6.1
    HHSEARCH: PDB: 2gbo_A SCOP: predicted a.23.6.1

    Topsan Members

    Tag pages as 'PF07408' to appear in this list.

    Name Annotation Author(s)
    2gbo

    Summary

    Pfam family PFAM:PF07408 {Protein of unknown function (DUF1507) } with 47 members in NR database. The first structural representative solved (PDB Id: TOPSAN:2gbo) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1fpoa2 classified as Open three-helical up-and-down bundle fold. However, no sequence similarity to this fold has been detected.

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