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PF07081

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1349 PDB: 3mep_A
    Solved by: NESG Priority Score: 3.6
    Member of this family is in PDB.
    Co-occurence with annotated domain(s) (no restrictions on number of architectures).
    HMMER:
      # sequence matches: 461 # architectures: 22 # taxonomy ids:252
    FFAS:
      Top FFAS hit in PDB: "3mepA, uncharacterized protein ECA2234" Top FFAS hit in Pfam: "PF09224, Domain of unknown function (DUF1961) "
    GRDB:
      Top significant hit (PDB90): "3mepA, structural genomics, unknown function ; crystal structure of eca2234 protein from erwinia carotovora, northeast structural genomics consortium target ewr44 "
      Top significant hit (PFAM25U): "PF06439, Domain of Unknown Function (DUF1080)"
    CATH: CATH Domain E-value CATH Node
      3c2uA02 4.40E-31 2.60.120.200
    PUBSERVER:
      Publications(s) found: 445
      Publications(s) meeting filtering criteria: 18
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 3mep_A SCOP: predicted b.29.1.23 ECC: predicted 3.2.-.-
    FFAS: PDB: 3mep_A SCOP: predicted b.29.1.23 ECC: predicted 3.2.-.-
    MGENTHREADER: PDB: 1y7b_A SCOP: b.29.1.23 ECC: 3.2.1.37
    PRC: PDB: 2exh_A SCOP: predicted b.67.2 ECC: 3.2.1.37
    BLASTP: PDB: 3o12_A
    HHBLITS: PDB: 3mep_A SCOP: predicted b.29.1.23 ECC: predicted 3.2.-.-
    COMPASS: PDB: 3c2u_A SCOP: predicted b.67.2 ECC: predicted 3.2.-.-
    CSBLAST: PDB: 3o12_A
    HHSEARCH: PDB: 3mep_A SCOP: predicted b.29.1.23 ECC: predicted 3.2.-.-
    E.coli Annotations
    NCBI: 16128256 PORTECO PORAL: yagH GeneExpDB: b0271

    Topsan Members

    Tag pages as 'PF07081' to appear in this list.

    No TOPSAN member(s) found.

    Summary

    Carbohydrate-binding domain. This domain is found in polysaccharide bidning and hydrolyzing proteins.

    Reviews

    References

     

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