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PF07072

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)

    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)

    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
      

    Resources
    Pfam ID: DUF1342 PDB: 2oez_A
    Solved by: MCSG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 341 # architectures: 2 # taxonomy ids:224
    FFAS:
      Top FFAS hit in PDB: "2oezA, UPF0289 protein VP2528" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "2oezA, structural genomics, unknown function ; protein of unknown function (duf1342) from vibrio parahaemolyticus "
    CATH: CATH Domain E-value CATH Node
      2oezA02 7.80E-58 1.10.3900.10
      2oezA01 9.70E-17 2.60.440.10
    PUBSERVER:
      Publications(s) found: 378
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 2oez_A
    FFAS: PDB: 2oez_A
    MGENTHREADER: PDB: 2oez_A
    BLASTP: PDB: 2oez_A
    HHBLITS: PDB: 2oez_A
    COMPASS: PDB: 2oez_A
    COMA: PDB: 2oez_A
    CSBLAST: PDB: 2oez_A
    HHSEARCH: PDB: 2oez_A
    E.coli Annotations
    NCBI: 16128095 PORTECO PORAL: yacF GeneExpDB: b0102

    Topsan Members

    Tag pages as 'PF07072' to appear in this list.

    Name Annotation Author(s)
    2oez

    Summary

    Pfam family
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    {Protein of unknown function (DUF1342) } with 233 members in NR database and additional 118 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id:
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    ) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain
    reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)
    classified as YacF-like fold. (Note: new fold solved by PSI, two subdomains: kinked four-helical bundle, inserted into beta-sandwich of 7 strands forming two sheets, probable biological unit is a dimer). However, this partial similarity is not sufficient for fold assignment. Thus it is a novel fold.

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