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The Open Protein Structure Annotation Network
PDB Keyword
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PF06938

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Topsan Members

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    Name Annotation Author(s)
    2ra9
    The Sbal_2486 gene from Shewanella baltica encodes the YP_001050848 protein, a member of the protein family PF06938 (DUF1285), which is an uncharacterized family of bacterial proteins (COG3816). Sbal_... pascual (2 edits)
    tinab (1 edits)

    Summary

    Pfam family PFAM:PF06938 {Protein of unknown function (DUF1285)} with 534 members in NR database and additional 453 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id: TOPSAN:2ra9) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1qjpa_ classified as new fold; some similarity to PH domain-like barrel fold. (Note: new fold solved by PSI, ). However, this partial similarity is not sufficient for fold assignment. Thus it is a novel fold.

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