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The Open Protein Structure Annotation Network
PDB Keyword
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PF06924

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1281 PDB: 2ijr_A
    Solved by: NYSGXRC Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 134 # architectures: 1 # taxonomy ids:27
    FFAS:
      Top FFAS hit in PDB: "2ijrA, Hypothetical protein api92" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "2ijrA, structural genomics, unknown function ; crystal structure of a hypothetical protein from yersinia pseudotuberculosis "
    CATH: CATH Domain E-value CATH Node
      2ijrA02 3.40E-45 1.10.3530.10
    FUNFAM (eval=0.0012 ): High-affinity nicotinic acid transporter domain 2 -like
    PUBSERVER:
      Publications(s) found: 84
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 2ijr_A ECC: predicted 2.8.-.-
    FFAS: PDB: 2ijr_A ECC: predicted 2.8.-.-
    BLASTP: PDB: 2ijr_A ECC: predicted 2.8.-.-
    HHBLITS: PDB: 2ijr_A ECC: predicted 2.8.-.-
    COMPASS: PDB: 2ijr_A ECC: predicted 2.8.-.-
    COMA: PDB: 2ijr_A ECC: predicted 2.8.-.-
    CSBLAST: PDB: 2ijr_A ECC: predicted 2.8.-.-
    HHSEARCH: PDB: 2ijr_A ECC: predicted 2.8.-.-

    Topsan Members

    Tag pages as 'PF06924' to appear in this list.

    Name Annotation Author(s)
    2ijr

    Summary

    Pfam family PFAM:PF06924 {Protein of unknown function (DUF1281) } with 32 members in NR database and additional 2 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id: TOPSAN:2ijr) was subject to FATCAT structural similarity search that yielded no results, thus suggesting that it is a novel fold.

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