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The Open Protein Structure Annotation Network
PDB Keyword
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PF06863

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1254 PDB: 2p3y_A
    Solved by: NESG Priority Score: 2.6
    Member of this family is in PDB.
    Member of this clan is in PDB.
    HMMER:
      # sequence matches: 587 # architectures: 11 # taxonomy ids:204
    FFAS:
      Top FFAS hit in PDB: "2p3yA, Hypothetical protein VPA0735" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "3u07A, structural genomics, unknown function ; crystal structure of the vpa0106 protein from vibrio parahaemolyticus. northeast structural genomics consortium target vpr106. "
    CATH: CATH Domain E-value CATH Node
      2p3yA03 1.80E-34 2.60.40.1610
    PUBSERVER:
      Publications(s) found: 160
      Publications(s) meeting filtering criteria: 1
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 2p3y_A ECC: predicted 3.6.-.-
    FFAS: PDB: 2p3y_A ECC: predicted 3.6.-.-
    MGENTHREADER: PDB: 2p3y_A ECC: predicted 3.6.-.-
    HHBLITS: PDB: 3u07_A ECC: predicted 3.6.-.-
    COMPASS: PDB: 2p3y_A ECC: predicted 3.6.-.-
    COMA: PDB: 2p3y_A ECC: predicted 3.6.-.-
    CSBLAST: PDB: 2p3y_A ECC: predicted 3.6.-.-
    HHSEARCH: PDB: 3u07_A ECC: predicted 3.6.-.-

    Topsan Members

    Tag pages as 'PF06863' to appear in this list.

    Name Annotation Author(s)
    2p3y

    Summary

    Pfam family PFAM:PF06863 {Protein of unknown function (DUF1254)} with 313 members in NR database and additional 145 members in the metagenomic datasets is represented in Archaea, Bacteria, and Eukaryota. The first structural representative solved (PDB Id: TOPSAN:2p3y) was subject to FATCAT structural similarity search that yielded no results, thus suggesting that it is a novel fold.

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