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The Open Protein Structure Annotation Network
PDB Keyword
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PF06855

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Pfam ID: DUF1250 PDB: 2fj6_A
    Solved by: NESG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 284 # architectures: 2 # taxonomy ids:136
    FFAS:
      Top FFAS hit in PDB: "2fj6A, Hypothetical UPF0346 protein yozE" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "2fj6A, structural genomics, unknown function ; solution nmr structure of the upf0346 protein yoze from bacillus subtilis. northeast structural genomics target sr391. "
    CATH: CATH Domain E-value CATH Node
      2fj6A01 6.50E-16 1.10.150.260
    PUBSERVER:
      Publications(s) found: 217
      Publications(s) meeting filtering criteria: 1
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 2o6k_A
    MGENTHREADER: PDB: 2fj6_A SCOP: predicted a.60.15.1
    PRC: PDB: 2fj6_A SCOP: predicted a.60.15.1
    BLASTP: PDB: 2o6k_A
    HHBLITS: PDB: 2o6k_A
    COMPASS: PDB: 2fj6_A SCOP: predicted a.60.15.1
    COMA: PDB: 2fj6_A SCOP: predicted a.60.15.1
    CSBLAST: PDB: 2o6k_A
    HHSEARCH: PDB: 2o6k_A

    Topsan Members

    Tag pages as 'PF06855' to appear in this list.

    Name Annotation Author(s)
    2fj6

    Summary

    Pfam family PFAM:PF06855 {Protein of unknown function (DUF1250)} with 159 members in NR database and additional 1 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id: TOPSAN:2fj6) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1a0pa1 classified as SAM domain-like fold. However, no sequence similarity to this fold has been detected.

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