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PF06262

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF1025 PDB: 3e11_A
    Solved by: JCSG Priority Score: 3.6
    Member of this family is in PDB.
    Co-occurence with annotated domain(s) (no restrictions on number of architectures).
    HMMER:
      # sequence matches: 470 # architectures: 3 # taxonomy ids:271
    FFAS:
      Top FFAS hit in PDB: "3e11A, predicted zincin-like metalloprotease" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "3e11A, structural genomics, unknown function ; crystal structure of predicted zincin-like metalloprotease (yp_873820.1) from acidothermus cellulolyticus 11b at 1.80 a resolution "
    CATH: CATH Domain E-value CATH Node
      2jihB01 0.0064
      2ddfA00 0.01 3.40.390.10
    PUBSERVER:
      Publications(s) found: 247
      Publications(s) meeting filtering criteria: 2
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 3e11_A
    FFAS: PDB: 3e11_A
    MGENTHREADER: PDB: 3e11_A
    BLASTP: PDB: 3e11_A
    HHBLITS: PDB: 3e11_A
    COMPASS: PDB: 3e11_B
    CSBLAST: PDB: 3e11_A
    HHSEARCH: PDB: 2ejq_A

    Topsan Members

    Tag pages as 'PF06262' to appear in this list.

    Name Annotation Author(s)
    3e11
    Gene Acel_2062 from Acidothermus cellulolyticus 11b codes for the YP_873820.1 protein, a member of the PFAM DUF1025 family (PF06262), a large (>200 members) family of hypothetical proteins from bacter... pascual (4 edits)
    adam (2 edits)
    krishna (2 edits)

    Summary

    This domain is found in metallo-peptidases but also in some kinases. Probably has to remain a DUF.

    Reviews

    References

     

    No references found.

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