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The Open Protein Structure Annotation Network
PDB Keyword
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PF05979

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF896 PDB: 2hep_A
    Solved by: NESG Priority Score: 1.6
    Member of this family is in PDB.
    HMMER:
      # sequence matches: 501 # architectures: 4 # taxonomy ids:292
    FFAS:
      Top FFAS hit in PDB: "2hepA, UPF0291 protein ynzC" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "2hepA, structural genomics, unknown function ; solution nmr structure of the upf0291 protein ynzc from bacillus subtilis. northeast structural genomics target sr384. "
    CATH: CATH Domain E-value CATH Node
      2hepA00 1.30E-09 1.10.287.540
    PUBSERVER:
      Publications(s) found: 273
      Publications(s) meeting filtering criteria: 2
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 3bhp_A SCOP: predicted e.41.1.1
    FFAS: PDB: 2hep_A
    MGENTHREADER: PDB: 3bhp_A SCOP: predicted e.41.1.1
    BLASTP: PDB: 3bhp_A SCOP: predicted e.41.1.1
    HHBLITS: PDB: 2hep_A
    COMPASS: PDB: 3bhp_A SCOP: predicted e.41.1.1
    COMA: PDB: 2hep_A
    CSBLAST: PDB: 3bhp_A SCOP: predicted e.41.1.1
    HHSEARCH: PDB: 2hep_A

    Topsan Members

    Tag pages as 'PF05979' to appear in this list.

    Name Annotation Author(s)
    2hep

    Summary

    Pfam family PFAM:PF05979 {Bacterial protein of unknown function (DUF896)} with 146 members in NR database and additional 4 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id: TOPSAN:2hep) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1z0jb1 classified as Long alpha hairpin fold. However, no sequence similarity to this fold has been detected.

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