The Open Protein Structure Annotation Network
PDB Keyword


    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Topsan Members

    Tag pages as 'PF05838' to appear in this list.

    Name Annotation Author(s)


    Pfam family PFAM:PF05838 {Predicted lysozyme (DUF847) } with 296 members in NR database and additional 218 members in the metagenomic datasets is represented in Bacteria, Eukaryota, and Viruses. The first structural representative solved (PDB Id: TOPSAN:2ikb) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1qsaa2 classified as Lysozyme-like fold. (Note: additional/lacking secondary structure elements). Profile-profile methods confirm remote homology between this family and superfamily of Lysozyme-like; fold of the same name. Based on remote homology confirmed by the structure one can hypothesize that this family is probably a lyzosyme




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