reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)Callstack:
at Groups/PF04242
at Template:PfamFamily
MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown.
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)Callstack:
at Groups/PF04242
at Template:PfamFamily
MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown.
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)Callstack:
at Groups/PF04242
at Template:PfamFamily
MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown.
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAssign expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptAssign.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptDiscard expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptDiscard.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptSequence expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptSequence.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)Callstack:
at Groups/PF04242
at Template:PfamFamily
MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown.
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAssign expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptAssign.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptDiscard expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptDiscard.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptSequence expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptSequence.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
Resources |
Pfam ID: | DUF424 | PDB: | 2qya_A |
Solved by: | NYSGXRC | Priority Score: | 1.6 |
Member of this family is in PDB. |
HMMER: |
# sequence matches: 119 | # architectures: 1 | # taxonomy ids:102 |
FFAS: |
Top FFAS hit in PDB: | "2qyaA, Uncharacterized conserved protein" | No significant hits in Pfam. | |
GRDB: |
Top significant hit (PDB90): | "2qyaA, structural genomics, unknown function ; crystal structure of an uncharacterized conserved protein from methanopyrus kandleri " |
CATH: | CATH Domain | E-value | CATH Node |
| 2qyaA01 | 1.90E-28 | 3.30.1860.10
|
PUBSERVER: |
Publications(s) found: 79 |
Publications(s) meeting filtering criteria: 0 |
GeneSilico Metaserver: (Login and password: Jamboree) |
PDBBLAST: PDB: 2qya_A |
FFAS: PDB: 2qya_A |
MGENTHREADER: PDB: 2qya_A |
BLASTP: PDB: 2qya_A |
HHBLITS: PDB: 2qya_A |
COMPASS: PDB: 2qya_A |
CSBLAST: PDB: 2qya_A |
HHSEARCH: PDB: 2qya_A |
Topsan Members
Tag pages as 'PF04242' to appear in this list.
Name | Annotation | Author(s) |
2qya
| | |
Summary
Pfam family
reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)Callstack:
at Groups/PF04242
MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown.
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
{Protein of unknown function (DUF424)} with 49 members in NR database and additional 20 members in the metagenomic datasets is represented in Archaea. The first structural representative solved (PDB Id:
reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)Callstack:
at Groups/PF04242
MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown.
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
) was subject to FATCAT structural similarity search that indicated
similarity to SCOP (v. 1.73) domain
reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown. (click for details)Callstack:
at Groups/PF04242
MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException: reference to undefined name 'note' Exception of type 'MindTouch.Deki.Script.Runtime.DekiScriptUndefinedNameException' was thrown.
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptVar expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptVar.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Evaluate (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state, Boolean evaluateProperties) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptAccess expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptAccess.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptCall expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Expr.DekiScriptCall.VisitWith[DekiScriptExpressionEvaluationState,Range] (IDekiScriptExpressionVisitor`2 visitor, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
at MindTouch.Deki.Script.Compiler.DekiScriptExpressionEvaluation.Visit (MindTouch.Deki.Script.Expr.DekiScriptReturnScope expr, DekiScriptExpressionEvaluationState state) [0x00000] in <filename unknown>:0
classified as IF3-like fold. (Note: additional/lacking secondary structure elements). However, no sequence similarity to this fold has been detected.