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PF04167

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF402 PDB: 2p12_A
    Solved by: MCSG Priority Score: 3.6
    Member of this family is in PDB.
    Co-occurence with annotated domain(s) (no restrictions on number of architectures).
    HMMER:
      # sequence matches: 654 # architectures: 4 # taxonomy ids:351
    FFAS:
      Top FFAS hit in PDB: "2p12A, Hypothetical protein DUF402" No significant hits in Pfam.
    GRDB:
      Top significant hit (PDB90): "3bxtA, hydrolase ; crystal structure of sc4828, a unique phosphatase from streptomyces coelicolor "
    CATH: CATH Domain E-value CATH Node
      2p12A01 7.90E-09 2.40.380.10
    FUNFAM (eval=0 ): RNA-binding protein AU-1 -like
    PUBSERVER:
      Publications(s) found: 72
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver: (Login and password: Jamboree)
    PHYRE: PDB: 3cbt_A ECC: 3.1.3.5
    MGENTHREADER: PDB: 3exm_A ECC: 3.6.1.6
    HHBLITS: PDB: 3exm_A ECC: 3.6.1.6
    COMPASS: PDB: 3cbt_A ECC: 3.1.3.5
    HHSEARCH: PDB: 3exm_A ECC: 3.6.1.6

    Topsan Members

    Tag pages as 'PF04167' to appear in this list.

    Name Annotation Author(s)
    2p12

    Summary

    Pfam family PFAM:PF04167 {Protein of unknown function (DUF402)} with 221 members in NR database and additional 8 members in the metagenomic datasets is represented in Archaea, and Bacteria. The first structural representative solved (PDB Id: TOPSAN:2p12) was subject to FATCAT structural similarity search that yielded no results, thus suggesting that it is a novel fold.

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