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PF02641

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF190 PDB: 1o51_A
    Solved by: JCSG Priority Score: 4.6
    Member of this family is in PDB.
    Member of this clan is in PDB.
    Co-occurence with annotated domain(s) (no restrictions on number of architectures).
    HMMER:
      # sequence matches: 366 # architectures: 8 # taxonomy ids:244
    FFAS:
      Top FFAS hit in PDB: "1o51A, Hypothetical protein TM0021" Top FFAS hit in Pfam: "PF00543, Nitrogen regulatory protein P-II "
    GRDB:
      Top significant hit (PDB90): "2dclA, structural genomics, unknown function ; structure of ph1503 protein from pyrococcus horikoshii ot3 "
    CATH: CATH Domain E-value CATH Node
      2dclA00 1.40E-30 3.30.70.120
      2cz4B00 0.0076
    FUNFAM (eval=0 ): Putative uncharacterized protein -like
    PUBSERVER:
      Publications(s) found: 208
      Publications(s) meeting filtering criteria: 2
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 1o51_A SCOP: d.58.5.4
    FFAS: PDB: 1o51_A SCOP: d.58.5.4
    MGENTHREADER: PDB: 2dcl_A SCOP: predicted d.58.5.4
    PRC: PDB: 1o51_A SCOP: d.58.5.4
    SPARKS: PDB: 1o2c_A
    BLASTP: PDB: 2dcl_A SCOP: predicted d.58.5.4
    HHBLITS: PDB: 1o51_A SCOP: d.58.5.4
    COMPASS: PDB: 2dcl_A SCOP: predicted d.58.5.4
    CSBLAST: PDB: 1o51_A SCOP: d.58.5.4
    HHSEARCH: PDB: 2dcl_A SCOP: predicted d.58.5.4

    Topsan Members

    Tag pages as 'PF02641' to appear in this list.

    Name Annotation Author(s)
    1o51
    The TM0021 gene of Thermotoga maritima encodes a protein from the DUF190 group (PF02641; COG:COG1993) related to the nitrogen regulatory protein P-II (PFAM:PF00543; PMID:14997579, 16484197). The prima... pascual (4 edits)
    chrisx (2 edits)
    kellrott (1 edits)

    Summary

    Structural similarity indicates that, structurally at least, this family is closely related to the nitrogen regulatory protien P-II, but there is little sequence similarity although the key motif is conserved.  This domain can occur in multiple copies and is can be found in association with the CBS domain. Possibly merge with P-II?

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    References

     

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