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PF02638

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

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    Resources
    Pfam ID: DUF187 PDB:
    Solved by: NESG Priority Score: 3.5
    Member of this clan is in PDB.
    Co-occurence with annotated domain(s) (no restrictions on number of architectures).
    HMMER:
      # sequence matches: 1087 # architectures: 33 # taxonomy ids:380
    FFAS:
      Top FFAS hit in PDB: "3mi6A, Alpha-galactosidase" Top FFAS hit in Pfam: "PF13200, Putative glycosyl hydrolase domain "
    GRDB:
      Top significant hit (PDB90): "3mi6A, hydrolase ; crystal structure of the alpha-galactosidase from lactobacillus brevis, northeast structural genomics consortium target lbr11. "
      Top significant hit (PFAM25U): "PF13200, Putative glycosyl hydrolase domain"
    CATH: CATH Domain E-value CATH Node
      1c7sA03 0.0091 3.20.20.80
      3a21B01 0.0011 3.20.20.70
      3ffjA02 0.0057
    FUNFAM (eval=0 ): UPF0748 lipoprotein yddW -like
    PUBSERVER:
      Publications(s) found: 1118
      Publications(s) meeting filtering criteria: 161
    GeneSilico Metaserver: (Login and password: Jamboree)
    PDBBLAST: PDB: 3mi6_A SCOP: predicted c.1.8 ECC: 3.2.1.22
    MGENTHREADER: PDB: 1sma_A SCOP: predicted c.1.8 ECC: predicted 3.2.-.-
    PRC: PDB: 1eh9_A SCOP: predicted c.1.8 ECC: 3.2.1.1
    SPARKS: PDB: 1ji2_A ECC: 3.2.1.135
    HHBLITS: PDB: 3edf_A SCOP: predicted c.1.8 ECC: 3.2.1.54
    COMPASS: PDB: 1zy9_A SCOP: predicted c.1.8 ECC: 3.2.1.22
    CSBLAST: PDB: 1m53_A SCOP: predicted c.1.8 ECC: 5.4.99.11
    HHSEARCH: PDB: 3mi6_A SCOP: predicted c.1.8 ECC: 3.2.1.22
    E.coli Annotations
    NCBI: 16129450 PORTECO PORAL: yddW GeneExpDB: b1491

    Topsan Members

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    Summary

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